McNamara, Harold M, Sabrina C Solley, Britt Adamson, Michelle M Chan, and Jared E. Toettcher. (2024) 2024. “Recording Morphogen Signals Reveals Mechanisms Underlying Gastruloid Symmetry Breaking”. Nature Cell Biology. Referenced from www.nature.com: Recording morphogen signals reveals mechanisms underlying gastruloid symmetry breaking.

Wilson, Maxwell Z., Pavithran T. Ravindran, Wendell A. Lim, and Jared E. Toettcher. 2017. “Tracing Information Flow from Erk to Target Gene Induction Reveals Mechanisms of Dynamic and Combinatorial Control”. Molecular Cell 67 (5): 757-69. Publisher’s Version: Tracing Information Flow from Erk to Target Gene Induction Reveals Mechanisms of Dynamic and Combinatorial Control.

Goglia, Alexander G., Maxwell Z. Wilson, Daniel B. DiGiorno, and Jared E. Toettcher. 2017. “Optogenetic Control of Ras Erk Signaling Using the Phy-PIF System”. In Kinase Signaling Networks, 3-20. New York, NY: Humana Press.

Johnson, Heath E., Yogesh Goyal, Nicole L. Pannucci, Trudi Schüpbach, Stanislav Y. Shvartsman, and Jared E. Toettcher. 2017. “The Spatiotemporal Limits of Developmental Erk Signaling”. Developmental Cell 40 (2): 185-92. Publisher’s Version: The spatiotemporal limits of developmental Erk signaling.

Shin, Yongdae, Joel Berry, Nicole Pannucci, Mikko P. Haataja, Jared E. Toettcher, and Clifford P. Brangwynne. 2017. “Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated OptoDroplets”. Cell 168 (1): 159-71. Publisher’s Version: Spatiotemporal control of intracellular phase transitions using light-activated optoDroplets.

Toettcher, Jared E., Joshua F. Apgar, Anya R. Castillo, Bruce Tidor, and Jacob K. White. 2011. “Recycling Circuit Simulation Techniques for Mass-Action Biochemical Kinetics”. In Advanced Simulation and Verification of Electronic and Biological Systems, 115-36. New York, NY: Springer Science & Business Media. Publisher’s Version: Recycling circuit simulation techniques for mass-action biochemical kinetics.

Toettcher, Jared E., Anya Castillo, Bruce Tidor, and Jacob K. White. 2011. “Biochemical Oscillator Sensitivity Analysis in the Presence of Conservation Constraints”. Proceedings of the 48th Design Automation Conference. San Diego, California: ACM. Publisher’s Version: Biochemical oscillator sensitivity analysis in the presence of conservation constraints.

Toettcher, Jared E. 2013. “Cell Cycle Arrest After DNA Damage”. In Encyclopedia of Systems Biology, 249-54. New York, NY: Springer. Publisher’s Version: Cell Cycle Arrest After DNA Damage.

Diner, Benjamin A., Krystal K. Lum, Jared E. Toettcher, and Ileana M. Cristea. 2016. “Viral DNA Sensors IFI16 and Cyclic GMP-AMP Synthase Possess Distinct Functions in Regulating Viral Gene Expression, Immune Defenses, and Apoptotic Responses During Herpesvirus Infection”. MBio 7 (6). Publisher’s Version: Viral DNA Sensors IFI16 and Cyclic GMP-AMP Synthase Possess Distinct Functions in Regulating Viral Gene Expression, Immune Defenses, and Apoptotic Responses during Herpesvirus Infection.